AbokiaBLAST is a parallel implementation of NCBI BLAST created by the inventors of the open-source mpiBLAST project. AbokiaBLAST inherits the super-scalable architecture from mpiBLAST but is re-factored and re-engineered to offer production quality. With intelligent task parallelization and I/O optimization, AbokiaBLAST enables users to massively accelerate large-scale BLAST search on clusters or supercomputers with a single command.
Why Use AbokiaBLAST?
Performance. AbokiaBLAST is up to 10 times faster than the open-source mpiBLAST. Its parallel engine scales efficiently across tens of thousands of compute cores.
Accuracy. The results of AbokiaBLAST match the new NCBI BLAST engine, i.e., 2.2.25.
Auto-Configuration. AbokiaBLAST greatly improves usability by automating the system configuration for optimal performance.
Timely Upgrades. The BLAST search engine is regularly upgraded to support the latest version of NCBI BLAST.
Service and Support. AbokiaBLAST offers rapid response and support from an experienced team of bioinfomaticists and computer scientists.
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